Sunday, December 6, 2015

Reflective journal on Awesome Microbe Carnival

Before AMC

I find a little bit confusing about the job scope of secretary, where most of the time Ee lyn was doing all the work and she didn't ask much help from me. Therefore me and Jossy felt guilty of not helping much all the time. To be honest I didn't join the preparation of AMC too much as other committee did and I felt really sorry. However, I think that trello is a good platform for us to update our progress as the other committee can access to it anytime.

During AMC
 
Me and Ee Lyn in charged of registration counter most of the time. If we realised there were some big groups of students entered, we will either ask some seniors to look after the registration counter or we take turn to go in so that we can explain our poster to them. This is because Alia and Azny were in charged of games booth, so there were only both Aisyah and Atikah to explain our poster to visitor.

On the second day, we realised our booklet is almost out of stock. Therefore we decided to keep few copies of booklets for the university that is confirm coming rather than giving it to the visitors. There was one malay visitor asked whether there is extra booklet from me as she really seems like she wanted to get more information about this carnival. However due to lacking of booklet I really felt sorry to reject her.

So far there was not much problems regarding the registration booth. But overall, I realised the most common and significant problem is that our committees did not approach visitors to explain to them more on microorganisms. Some of us just stand in front of the poster and wait for the visitor to come nearer to the poster. I can still remember there were two girls asking me question regarding disk diffusion method. Based on what I had carried out in experiment before, I told her that this method is about placing a small rounded filter paper soaked with antibiotics on the agar plate cultured with bacteria to be tested. After that we grow the bacteria and observe whether there is presence of 'zone of inhibition'. In my explanation, zone of inhibition is a transparent ring around the disk. As the growth of bacteria is indicated by cloudiness or colonies on agar plate, if the bacteria is susceptible to particular antibiotics then the area around the disk will be no bacteria growing. As a result the area around the disk appear clear.

In a conclusion, I think we need to take more initiative to introduce to the visitor more on our own field of studies. Moreover, we should have studied more latest article or updates regarding microbiology so that we could answer when they asked us questions. Also, we can tell them what is the importance or impact of microorganisms towards medical, manufacturing and food industry by relating microbes to the current issues.

Friday, October 9, 2015

Cell wall and membrane structure of prokaryotes (Part II)

4)Fimbriae and Pili
- Both made up of pilin
 
-
Fimbriae
Pili
Differences
Shorter
Longer
Help the cell to adhere to surface
Join bacterial cells for DNA transfer
Distributed evenly around the cell ( from several to hundreds)
Only one or two per cell
Similarities
·       Made up of protein pilin
·       Shorter and thinner than flagella

 
 
 
No.
Characteristics
Cilia
1
Definition
Cilia are short, hair like appendages extending from the surface of a living cell.
Flagella are long, threadlike appendages on the surface of a living cell.
2
Number
Numerous
Less in Number
3
Length
Short and hair like organelle (5-10µ)
Long wipe like organelle (150µ)
4
Occurrence
Occurs throughout the cell surface.
Presence at one end or two ends or all over the surface.
5
Cross section
Nexin arm present.
Nexin arm absent
6
Density
Many (hundreds) per cell
Few (less than 10) per cell
7
Beating
Cilia beat in a coordinated rhythm either simultaneously (synchronous) or one after the other (metachronic).
They beat independent of each other.
8
Motion
Rotational, like a motor, very fast moving
Wave-like, undulating, sinusoidal, slow movement compared to cilia
9
Found in
Eukaryotic cells
Eukaryotic and prokaryotic cells
10
Energy Production
Cilia use ‘kinesin’ which has an ATPase activity that produces energy to perform the movement.
Flagella are powered by the proton-motive force by the plasma membrane.
11
Functions
Helps in locomotion, feeding circulation, aeration, etc.
Help mainly in locomotion only.
12
Examples
Cilia present in Paramecium
Flagella present in Salmonella
Difference between flagella and cilia

 
5) Cell wall
Anything that is fit can pass through cell wall
- Function:
  • Contributes to pathogenicity (teichoic acid and peptidoglycan)
  • Classification into gram positive or gram negative
  • Prevent rupture of bacteria cell
  • Provide shape to bacteria
  • Anchor for surface appendages ( flagella, cilia, pili)
  • Withstand osmotic pressure

S.N.
Characteristics
Gram Positive
Gram Negative
1
Gram Reaction

Retain crystal violet dye and stain blue or purple

Can be decolorized to accept counterstain (safranin) and stain pink or red
2
Cell Wall
Cell Wall is 20-30 nm thick.
Cell Wall is 8-12 nm thick.
3
Cell Wall
The wall is Smooth.
The wall is wavy.
4
Peptidoglycan Layer
Thick (multilayered)
Thin (single-layered)
5
Teichoic Acids
Present in many (contribute to pathogenicity)
Absent
6
Periplasmic Space
Absent
Present
7
Outer Membrane
Absent
Present
8
Porins
Absent
Occurs in Outer Membrane
9
Lipopolysaccharide (LPS) Content
Virtually None
High (contribute to pathogenicity)
10
Lipid and Lipoprotein Content
Low (acid-fast bacteria have lipids linked to peptidoglycan)
High (because of presence of outer membrane)
11
Mesosomes
Quite Prominent
Less Prominent
12
Flagellar Structure
2 rings in basal body
4 rings in basal body
13
Toxin Produced
Exotoxins
Endotoxins or Exotoxins
14
Resistance to Physical Disruption
High
Low
15
Cell Wall Disruption by Lysozyme
High
Low (requires pretreatment to destabilize outer membrane)
16
Susceptibility to Penicillin and Sulfonamide
High
Low
17
Susceptibility to Streptomycin, Chloramphenicol and Tetracycline
Low
High
18
Inhibition by Basic Dyes
High
Low
19
Susceptibility to Anionic Detergents
High
Low
20
Resistance to Sodium Azide
High
Low
21
Resistance to Drying
High
Low